Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx1P83917 Gm6311-201ENSMUST00000073790 878 ntBASIC19.3■□□□□ 0.68
Cbx1P83917 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx1P83917 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx1P83917 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.3■□□□□ 0.68
Cbx1P83917 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx1P83917 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx1P83917 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.3■□□□□ 0.68
Cbx1P83917 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx1P83917 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Cbx1P83917 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.29■□□□□ 0.68
Cbx1P83917 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.29■□□□□ 0.68
Cbx1P83917 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
Cbx1P83917 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cbx1P83917 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.29■□□□□ 0.68
Cbx1P83917 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Cbx1P83917 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.29■□□□□ 0.68
Cbx1P83917 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cbx1P83917 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbx1P83917 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.28■□□□□ 0.68
Cbx1P83917 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cbx1P83917 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cbx1P83917 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
Cbx1P83917 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbx1P83917 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cbx1P83917 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cbx1P83917 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cbx1P83917 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx1P83917 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx1P83917 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.27■□□□□ 0.68
Cbx1P83917 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.27■□□□□ 0.68
Cbx1P83917 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx1P83917 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx1P83917 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Cbx1P83917 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbx1P83917 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cbx1P83917 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cbx1P83917 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cbx1P83917 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cbx1P83917 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cbx1P83917 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbx1P83917 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cbx1P83917 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.25■□□□□ 0.67
Cbx1P83917 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cbx1P83917 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cbx1P83917 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Cbx1P83917 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cbx1P83917 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx1P83917 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.24■□□□□ 0.67
Cbx1P83917 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cbx1P83917 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx1P83917 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx1P83917 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx1P83917 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx1P83917 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms