Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Gm26833-201ENSMUST00000180899 440 ntBASIC14.61□□□□□ -0.07
Sssca1P56873 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Sssca1P56873 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sssca1P56873 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.61□□□□□ -0.07
Sssca1P56873 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.6□□□□□ -0.07
Sssca1P56873 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sssca1P56873 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sssca1P56873 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.6□□□□□ -0.07
Sssca1P56873 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sssca1P56873 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Sssca1P56873 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sssca1P56873 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sssca1P56873 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.59□□□□□ -0.07
Sssca1P56873 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Gm12821-201ENSMUST00000120022 600 ntBASIC14.59□□□□□ -0.07
Sssca1P56873 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Sssca1P56873 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.59□□□□□ -0.07
Sssca1P56873 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sssca1P56873 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sssca1P56873 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Sssca1P56873 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.58□□□□□ -0.07
Sssca1P56873 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sssca1P56873 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sssca1P56873 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sssca1P56873 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sssca1P56873 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.58□□□□□ -0.08
Sssca1P56873 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.58□□□□□ -0.08
Sssca1P56873 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.58□□□□□ -0.08
Sssca1P56873 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.58□□□□□ -0.08
Sssca1P56873 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sssca1P56873 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.58□□□□□ -0.08
Sssca1P56873 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sssca1P56873 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sssca1P56873 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sssca1P56873 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sssca1P56873 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sssca1P56873 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sssca1P56873 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.57□□□□□ -0.08
Sssca1P56873 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sssca1P56873 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Sssca1P56873 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.57□□□□□ -0.08
Sssca1P56873 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sssca1P56873 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.57□□□□□ -0.08
Sssca1P56873 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms