Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC083880.1-201ENST00000608266 535 ntBASIC22.09■■□□□ 1.13
VCPP55072 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.09■■□□□ 1.13
VCPP55072 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VCPP55072 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VCPP55072 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.09■■□□□ 1.13
VCPP55072 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VCPP55072 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
VCPP55072 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VCPP55072 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VCPP55072 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.08■■□□□ 1.13
VCPP55072 AP006587.3-201ENST00000525742 1516 ntBASIC22.08■■□□□ 1.13
VCPP55072 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.08■■□□□ 1.13
VCPP55072 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.08■■□□□ 1.13
VCPP55072 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VCPP55072 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
VCPP55072 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VCPP55072 FEM1AP4-201ENST00000443167 1987 ntBASIC22.08■■□□□ 1.12
VCPP55072 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
VCPP55072 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
VCPP55072 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
VCPP55072 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VCPP55072 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
VCPP55072 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.07■■□□□ 1.12
VCPP55072 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.07■■□□□ 1.12
VCPP55072 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
VCPP55072 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.07■■□□□ 1.12
VCPP55072 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
VCPP55072 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.07■■□□□ 1.12
VCPP55072 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.07■■□□□ 1.12
VCPP55072 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.07■■□□□ 1.12
VCPP55072 AL034346.1-201ENST00000568244 1277 ntBASIC22.07■■□□□ 1.12
VCPP55072 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.07■■□□□ 1.12
VCPP55072 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
VCPP55072 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VCPP55072 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.07■■□□□ 1.12
VCPP55072 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.07■■□□□ 1.12
VCPP55072 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VCPP55072 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VCPP55072 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.06■■□□□ 1.12
VCPP55072 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 FAM210CP-201ENST00000445714 574 ntBASIC22.06■■□□□ 1.12
VCPP55072 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.06■■□□□ 1.12
VCPP55072 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.06■■□□□ 1.12
VCPP55072 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.06■■□□□ 1.12
VCPP55072 AC010331.1-201ENST00000611423 582 ntBASIC22.06■■□□□ 1.12
VCPP55072 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.06■■□□□ 1.12
VCPP55072 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.06■■□□□ 1.12
VCPP55072 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.06■■□□□ 1.12
VCPP55072 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.06■■□□□ 1.12
VCPP55072 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VCPP55072 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.05■■□□□ 1.12
VCPP55072 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
VCPP55072 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.05■■□□□ 1.12
VCPP55072 CYP2T1P-201ENST00000432607 1285 ntBASIC22.05■■□□□ 1.12
VCPP55072 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.05■■□□□ 1.12
VCPP55072 AC008550.1-201ENST00000511500 884 ntBASIC22.05■■□□□ 1.12
VCPP55072 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.05■■□□□ 1.12
VCPP55072 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
VCPP55072 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.05■■□□□ 1.12
VCPP55072 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.05■■□□□ 1.12
VCPP55072 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.05■■□□□ 1.12
VCPP55072 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.04■■□□□ 1.12
VCPP55072 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 AF106564.1-201ENST00000607058 2553 ntBASIC22.04■■□□□ 1.12
VCPP55072 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.04■■□□□ 1.12
VCPP55072 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.04■■□□□ 1.12
VCPP55072 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.04■■□□□ 1.12
VCPP55072 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.04■■□□□ 1.12
VCPP55072 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.04■■□□□ 1.12
VCPP55072 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
VCPP55072 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
VCPP55072 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VCPP55072 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
VCPP55072 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VCPP55072 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.03■■□□□ 1.12
VCPP55072 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VCPP55072 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VCPP55072 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
VCPP55072 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VCPP55072 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.03■■□□□ 1.12
VCPP55072 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VCPP55072 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms