Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 AHC2YCR082W 387 nt2.63□□□□□ -1.99
SSN8P47821 YGL159WYGL159W 1113 nt2.63□□□□□ -1.99
SSN8P47821 YIL029CYIL029C 429 nt2.63□□□□□ -1.99
SSN8P47821 MCR1YKL150W 909 nt2.63□□□□□ -1.99
SSN8P47821 DAD2YKR083C 402 nt2.63□□□□□ -1.99
SSN8P47821 NYV1YLR093C 762 nt2.63□□□□□ -1.99
SSN8P47821 YMR173W-AYMR173W-A 1185 nt2.63□□□□□ -1.99
SSN8P47821 ATP19YOL077W-A 207 nt2.63□□□□□ -1.99
SSN8P47821 YOR169CYOR169C 465 nt2.63□□□□□ -1.99
SSN8P47821 TRS20YBR254C 528 nt2.63□□□□□ -1.99
SSN8P47821 SOK1YDR006C 2706 nt2.63□□□□□ -1.99
SSN8P47821 MSH4YFL003C 2637 nt2.63□□□□□ -1.99
SSN8P47821 SGM1YJR134C 2124 nt2.62□□□□□ -1.99
SSN8P47821 YDR537CYDR537C 606 nt2.62□□□□□ -1.99
SSN8P47821 PAU10YDR542W 363 nt2.62□□□□□ -1.99
SSN8P47821 HPA3YEL066W 540 nt2.62□□□□□ -1.99
SSN8P47821 PRM8YGL053W 714 nt2.62□□□□□ -1.99
SSN8P47821 PAU11YGL261C 363 nt2.62□□□□□ -1.99
SSN8P47821 LRP1YHR081W 555 nt2.62□□□□□ -1.99
SSN8P47821 PAU4YLR461W 363 nt2.62□□□□□ -1.99
SSN8P47821 YMR194C-AYMR194C-A 225 nt2.62□□□□□ -1.99
SSN8P47821 YNL043CYNL043C 321 nt2.62□□□□□ -1.99
SSN8P47821 RPL16BYNL069C 597 nt2.62□□□□□ -1.99
SSN8P47821 MDM1YML104C 3384 nt2.62□□□□□ -1.99
SSN8P47821 ATP22YDR350C 2055 nt2.62□□□□□ -1.99
SSN8P47821 SRB4YER022W 2064 nt2.62□□□□□ -1.99
SSN8P47821 SHE9YDR393W 1371 nt2.61□□□□□ -1.99
SSN8P47821 SWR1YDR334W 4545 nt2.61□□□□□ -1.99
SSN8P47821 YDR338CYDR338C 2088 nt2.61□□□□□ -1.99
SSN8P47821 PHR1YOR386W 1698 nt2.61□□□□□ -1.99
SSN8P47821 YEL030C-AYEL030C-A 315 nt2.61□□□□□ -1.99
SSN8P47821 RPF1YHR088W 888 nt2.61□□□□□ -1.99
SSN8P47821 YIL012WYIL012W 342 nt2.61□□□□□ -1.99
SSN8P47821 YIR020CYIR020C 303 nt2.61□□□□□ -1.99
SSN8P47821 RPL20AYMR242C 519 nt2.61□□□□□ -1.99
SSN8P47821 YMR304C-AYMR304C-A 351 nt2.61□□□□□ -1.99
SSN8P47821 CWC22YGR278W 1734 nt2.61□□□□□ -1.99
SSN8P47821 YDR179W-AYDR179W-A 1392 nt2.61□□□□□ -1.99
SSN8P47821 ARK1YNL020C 1917 nt2.6□□□□□ -1.99
SSN8P47821 IRC2YDR112W 309 nt2.6□□□□□ -1.99
SSN8P47821 YGL042CYGL042C 306 nt2.6□□□□□ -1.99
SSN8P47821 TAP42YMR028W 1101 nt2.6□□□□□ -1.99
SSN8P47821 MRPL44YMR225C 297 nt2.6□□□□□ -1.99
SSN8P47821 YOL085W-AYOL085W-A 213 nt2.6□□□□□ -1.99
SSN8P47821 YOR364WYOR364W 369 nt2.6□□□□□ -1.99
SSN8P47821 ECM21YBL101C 3354 nt2.6□□□□□ -1.99
SSN8P47821 KEL2YGR238C 2649 nt2.6□□□□□ -1.99
SSN8P47821 YDR210W-BYDR210W-B 5313 nt2.6□□□□□ -1.99
SSN8P47821 YDR261W-BYDR261W-B 5313 nt2.6□□□□□ -1.99
SSN8P47821 YFL002W-AYFL002W-A 5313 nt2.6□□□□□ -1.99
SSN8P47821 YGR161W-BYGR161W-B 5313 nt2.6□□□□□ -1.99
SSN8P47821 YLR410W-BYLR410W-B 5313 nt2.6□□□□□ -1.99
SSN8P47821 YCL019WYCL019W 5313 nt2.6□□□□□ -1.99
SSN8P47821 DAL5YJR152W 1632 nt2.6□□□□□ -1.99
SSN8P47821 NET1YJL076W 3570 nt2.6□□□□□ -1.99
SSN8P47821 STE23YLR389C 3084 nt2.6□□□□□ -1.99
SSN8P47821 SSP1YHR184W 1716 nt2.59□□□□□ -1.99
SSN8P47821 SNU56YDR240C 1479 nt2.59□□□□□ -1.99
SSN8P47821 YCR108CYCR108C 192 nt2.59□□□□□ -1.99
SSN8P47821 MRM2YGL136C 963 nt2.59□□□□□ -1.99
SSN8P47821 YGR242WYGR242W 309 nt2.59□□□□□ -1.99
SSN8P47821 CIC1YHR052W 1131 nt2.59□□□□□ -1.99
SSN8P47821 BAT1YHR208W 1182 nt2.59□□□□□ -1.99
SSN8P47821 YIL068W-AYIL068W-A 384 nt2.59□□□□□ -1.99
SSN8P47821 CDC123YLR215C 1083 nt2.59□□□□□ -1.99
SSN8P47821 YLR297WYLR297W 390 nt2.59□□□□□ -1.99
SSN8P47821 NGL1YOL042W 1092 nt2.59□□□□□ -1.99
SSN8P47821 HEM4YOR278W 828 nt2.59□□□□□ -1.99
SSN8P47821 YOR343W-AYOR343W-A 1317 nt2.59□□□□□ -2
SSN8P47821 PBS2YJL128C 2007 nt2.59□□□□□ -2
SSN8P47821 JJJ2YJL162C 1752 nt2.59□□□□□ -2
SSN8P47821 YBT1YLL048C 4986 nt2.59□□□□□ -2
SSN8P47821 RGR1YLR071C 3249 nt2.59□□□□□ -2
SSN8P47821 CYR1YJL005W 6081 nt2.58□□□□□ -2
SSN8P47821 VPS74YDR372C 1038 nt2.58□□□□□ -2
SSN8P47821 SDH3YKL141W 597 nt2.58□□□□□ -2
SSN8P47821 PAU23YLR037C 375 nt2.58□□□□□ -2
SSN8P47821 FYV7YLR068W 456 nt2.58□□□□□ -2
SSN8P47821 YBL039W-BYBL039W-B 180 nt2.58□□□□□ -2
SSN8P47821 YMR181CYMR181C 465 nt2.58□□□□□ -2
SSN8P47821 RIO2YNL207W 1278 nt2.58□□□□□ -2
SSN8P47821 YNR021WYNR021W 1215 nt2.58□□□□□ -2
SSN8P47821 YNR034W-AYNR034W-A 297 nt2.58□□□□□ -2
SSN8P47821 YOL013W-BYOL013W-B 291 nt2.58□□□□□ -2
SSN8P47821 VID24YBR105C 1089 nt2.58□□□□□ -2
SSN8P47821 SLP1YOR154W 1764 nt2.58□□□□□ -2
SSN8P47821 GDI1YER136W 1356 nt2.58□□□□□ -2
SSN8P47821 KAR9YPL269W 1935 nt2.58□□□□□ -2
SSN8P47821 SAK1YER129W 3429 nt2.58□□□□□ -2
SSN8P47821 PSY2YNL201C 2577 nt2.57□□□□□ -2
SSN8P47821 RGC1YPR115W 3252 nt2.57□□□□□ -2
SSN8P47821 MTC7YEL033W 420 nt2.57□□□□□ -2
SSN8P47821 PRE1YER012W 597 nt2.57□□□□□ -2
SSN8P47821 YER175W-AYER175W-A 165 nt2.57□□□□□ -2
SSN8P47821 YIR036W-AYIR036W-A 402 nt2.57□□□□□ -2
SSN8P47821 MRPL33YMR286W 261 nt2.57□□□□□ -2
SSN8P47821 POL3YDL102W 3294 nt2.57□□□□□ -2
SSN8P47821 NMD2YHR077C 3270 nt2.57□□□□□ -2
SSN8P47821 ISW1YBR245C 3390 nt2.57□□□□□ -2
SSN8P47821 GEA1YJR031C 4227 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms