Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmx3P42581 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.04■□□□□ -0
Hmx3P42581 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmx3P42581 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmx3P42581 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmx3P42581 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.04■□□□□ -0
Hmx3P42581 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.04■□□□□ -0
Hmx3P42581 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmx3P42581 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.04■□□□□ -0
Hmx3P42581 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hmx3P42581 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hmx3P42581 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmx3P42581 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.03■□□□□ -0
Hmx3P42581 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Hmx3P42581 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.03■□□□□ -0
Hmx3P42581 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hmx3P42581 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Gm12821-201ENSMUST00000120022 600 ntBASIC15.03■□□□□ -0
Hmx3P42581 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.03■□□□□ -0
Hmx3P42581 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Gm27454-201ENSMUST00000185090 204 ntBASIC15.03■□□□□ -0
Hmx3P42581 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.03■□□□□ -0
Hmx3P42581 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.03■□□□□ -0
Hmx3P42581 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Hmx3P42581 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hmx3P42581 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hmx3P42581 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmx3P42581 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Hmx3P42581 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Hmx3P42581 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.02■□□□□ -0
Hmx3P42581 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmx3P42581 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Hmx3P42581 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hmx3P42581 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hmx3P42581 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmx3P42581 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.01□□□□□ -0.01
Hmx3P42581 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.01□□□□□ -0.01
Hmx3P42581 Gm8493-201ENSMUST00000196881 489 ntBASIC15.01□□□□□ -0.01
Hmx3P42581 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.01□□□□□ -0.01
Hmx3P42581 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hmx3P42581 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmx3P42581 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms