Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6bP23440 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6bP23440 Gm10138-203ENSMUST00000206952 366 ntBASIC19.63■□□□□ 0.73
Pde6bP23440 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6bP23440 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6bP23440 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pde6bP23440 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pde6bP23440 Mir5122-201ENSMUST00000175004 89 ntBASIC19.62■□□□□ 0.73
Pde6bP23440 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6bP23440 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Pde6bP23440 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6bP23440 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 Rarb-207ENSMUST00000225921 2756 ntBASIC19.61■□□□□ 0.73
Pde6bP23440 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pde6bP23440 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6bP23440 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.6■□□□□ 0.73
Pde6bP23440 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pde6bP23440 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Pde6bP23440 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.6■□□□□ 0.73
Pde6bP23440 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.6■□□□□ 0.73
Pde6bP23440 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.6■□□□□ 0.73
Pde6bP23440 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6bP23440 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Pde6bP23440 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.59■□□□□ 0.73
Pde6bP23440 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pde6bP23440 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Pde6bP23440 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pde6bP23440 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pde6bP23440 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pde6bP23440 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6bP23440 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.58■□□□□ 0.73
Pde6bP23440 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Pde6bP23440 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pde6bP23440 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6bP23440 Gm11643-201ENSMUST00000119578 864 ntBASIC19.58■□□□□ 0.72
Pde6bP23440 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.58■□□□□ 0.72
Pde6bP23440 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6bP23440 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6bP23440 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6bP23440 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pde6bP23440 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pde6bP23440 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pde6bP23440 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Gm43183-201ENSMUST00000200632 547 ntBASIC19.57■□□□□ 0.72
Pde6bP23440 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.57■□□□□ 0.72
Pde6bP23440 Gm5417-201ENSMUST00000079706 384 ntBASIC19.57■□□□□ 0.72
Pde6bP23440 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.57■□□□□ 0.72
Pde6bP23440 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms