Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 STE5YDR103W 2754 nt3.84□□□□□ -1.79
SNF5P18480 RRT13YER066W 558 nt3.84□□□□□ -1.79
SNF5P18480 HIS5YIL116W 1158 nt3.84□□□□□ -1.79
SNF5P18480 YKL162C-AYKL162C-A 153 nt3.84□□□□□ -1.79
SNF5P18480 FBP1YLR377C 1047 nt3.84□□□□□ -1.79
SNF5P18480 JIP5YPR169W 1479 nt3.84□□□□□ -1.8
SNF5P18480 CWH43YCR017C 2862 nt3.84□□□□□ -1.8
SNF5P18480 MET4YNL103W 2019 nt3.83□□□□□ -1.8
SNF5P18480 YLR001CYLR001C 2589 nt3.83□□□□□ -1.8
SNF5P18480 YDL094CYDL094C 510 nt3.83□□□□□ -1.8
SNF5P18480 YHR139C-AYHR139C-A 312 nt3.83□□□□□ -1.8
SNF5P18480 YHR214W-AYHR214W-A 486 nt3.83□□□□□ -1.8
SNF5P18480 YAR068WYAR068W 486 nt3.83□□□□□ -1.8
SNF5P18480 snR13snR13 124 nt3.83□□□□□ -1.8
SNF5P18480 HOYDL227C 1761 nt3.83□□□□□ -1.8
SNF5P18480 YKL222CYKL222C 2118 nt3.83□□□□□ -1.8
SNF5P18480 FAA1YOR317W 2103 nt3.82□□□□□ -1.8
SNF5P18480 YCR081C-AYCR081C-A 237 nt3.82□□□□□ -1.8
SNF5P18480 snR7-SsnR7-S 179 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)CtQ(UUG)C 72 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)D1tQ(UUG)D1 72 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)D2tQ(UUG)D2 72 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)D3tQ(UUG)D3 72 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)E1tQ(UUG)E1 72 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)HtQ(UUG)H 72 nt3.82□□□□□ -1.8
SNF5P18480 tQ(UUG)LtQ(UUG)L 72 nt3.82□□□□□ -1.8
SNF5P18480 YLR031WYLR031W 561 nt3.82□□□□□ -1.8
SNF5P18480 YNL179CYNL179C 438 nt3.82□□□□□ -1.8
SNF5P18480 YOP1YPR028W 543 nt3.82□□□□□ -1.8
SNF5P18480 SRB4YER022W 2064 nt3.82□□□□□ -1.8
SNF5P18480 PBS2YJL128C 2007 nt3.82□□□□□ -1.8
SNF5P18480 RPO21YDL140C 5202 nt3.81□□□□□ -1.8
SNF5P18480 ARF1YDL192W 546 nt3.81□□□□□ -1.8
SNF5P18480 PAU13YHL046C 363 nt3.81□□□□□ -1.8
SNF5P18480 HHT2YNL031C 411 nt3.81□□□□□ -1.8
SNF5P18480 IMP4YNL075W 873 nt3.81□□□□□ -1.8
SNF5P18480 YPL080CYPL080C 327 nt3.81□□□□□ -1.8
SNF5P18480 YPL142CYPL142C 318 nt3.81□□□□□ -1.8
SNF5P18480 NDT80YHR124W 1884 nt3.81□□□□□ -1.8
SNF5P18480 KRI1YNL308C 1776 nt3.81□□□□□ -1.8
SNF5P18480 EGT2YNL327W 3126 nt3.81□□□□□ -1.8
SNF5P18480 SSH1YBR283C 1473 nt3.8□□□□□ -1.8
SNF5P18480 CWH41YGL027C 2502 nt3.8□□□□□ -1.8
SNF5P18480 RPL1BYGL135W 654 nt3.8□□□□□ -1.8
SNF5P18480 YHR007C-AYHR007C-A 216 nt3.8□□□□□ -1.8
SNF5P18480 GTT2YLL060C 702 nt3.8□□□□□ -1.8
SNF5P18480 DGK1YOR311C 873 nt3.8□□□□□ -1.8
SNF5P18480 RPL1AYPL220W 654 nt3.8□□□□□ -1.8
SNF5P18480 SSP1YHR184W 1716 nt3.79□□□□□ -1.8
SNF5P18480 EMP70YLR083C 2004 nt3.79□□□□□ -1.8
SNF5P18480 VHS3YOR054C 2025 nt3.79□□□□□ -1.8
SNF5P18480 GPI8YDR331W 1236 nt3.79□□□□□ -1.8
SNF5P18480 ATP17YDR377W 306 nt3.79□□□□□ -1.8
SNF5P18480 YER076W-AYER076W-A 348 nt3.79□□□□□ -1.8
SNF5P18480 YER091C-AYER091C-A 222 nt3.79□□□□□ -1.8
SNF5P18480 RPS26BYER131W 360 nt3.79□□□□□ -1.8
SNF5P18480 YGR107WYGR107W 450 nt3.79□□□□□ -1.8
SNF5P18480 RAD27YKL113C 1149 nt3.79□□□□□ -1.8
SNF5P18480 TIR2YOR010C 756 nt3.79□□□□□ -1.8
SNF5P18480 FAS2YPL231W 5664 nt3.79□□□□□ -1.8
SNF5P18480 TCB3YML072C 4638 nt3.79□□□□□ -1.8
SNF5P18480 ERG28YER044C 447 nt3.78□□□□□ -1.8
SNF5P18480 YIL012WYIL012W 342 nt3.78□□□□□ -1.8
SNF5P18480 ADI1YMR009W 540 nt3.78□□□□□ -1.8
SNF5P18480 CAF130YGR134W 3369 nt3.78□□□□□ -1.8
SNF5P18480 YJR030CYJR030C 2238 nt3.77□□□□□ -1.81
SNF5P18480 tC(GCA)BtC(GCA)B 72 nt3.77□□□□□ -1.81
SNF5P18480 tC(GCA)GtC(GCA)G 72 nt3.77□□□□□ -1.81
SNF5P18480 tC(GCA)P1tC(GCA)P1 72 nt3.77□□□□□ -1.81
SNF5P18480 tC(GCA)P2tC(GCA)P2 72 nt3.77□□□□□ -1.81
SNF5P18480 YIR040CYIR040C 333 nt3.77□□□□□ -1.81
SNF5P18480 ISF1YMR081C 1017 nt3.77□□□□□ -1.81
SNF5P18480 PFY1YOR122C 381 nt3.77□□□□□ -1.81
SNF5P18480 YOL075CYOL075C 3885 nt3.76□□□□□ -1.81
SNF5P18480 KIN82YCR091W 2163 nt3.76□□□□□ -1.81
SNF5P18480 PEP5YMR231W 3090 nt3.76□□□□□ -1.81
SNF5P18480 YDR230WYDR230W 348 nt3.76□□□□□ -1.81
SNF5P18480 YGL007C-AYGL007C-A 87 nt3.76□□□□□ -1.81
SNF5P18480 NOP19YGR251W 591 nt3.76□□□□□ -1.81
SNF5P18480 PET191YJR034W 327 nt3.76□□□□□ -1.81
SNF5P18480 SHE2YKL130C 741 nt3.76□□□□□ -1.81
SNF5P18480 YLR294CYLR294C 330 nt3.76□□□□□ -1.81
SNF5P18480 LSM2YBL026W 288 nt3.76□□□□□ -1.81
SNF5P18480 ECM16YMR128W 3804 nt3.76□□□□□ -1.81
SNF5P18480 URA10YMR271C 684 nt3.76□□□□□ -1.81
SNF5P18480 SUI1YNL244C 327 nt3.76□□□□□ -1.81
SNF5P18480 GAL11YOL051W 3246 nt3.76□□□□□ -1.81
SNF5P18480 ECM22YLR228C 2445 nt3.76□□□□□ -1.81
SNF5P18480 MPS1YDL028C 2295 nt3.75□□□□□ -1.81
SNF5P18480 tW(UCA)QtW(UCA)Q 74 nt3.75□□□□□ -1.81
SNF5P18480 MSL1YIR009W 336 nt3.75□□□□□ -1.81
SNF5P18480 YJL202CYJL202C 348 nt3.75□□□□□ -1.81
SNF5P18480 SLM6YBR266C 453 nt3.75□□□□□ -1.81
SNF5P18480 YKL100CYKL100C 1764 nt3.75□□□□□ -1.81
SNF5P18480 NRP1YDL167C 2160 nt3.75□□□□□ -1.81
SNF5P18480 YSW1YBR148W 1830 nt3.74□□□□□ -1.81
SNF5P18480 ATG2YNL242W 4779 nt3.74□□□□□ -1.81
SNF5P18480 FUN12YAL035W 3009 nt3.74□□□□□ -1.81
SNF5P18480 ATP22YDR350C 2055 nt3.74□□□□□ -1.81
SNF5P18480 RPS21BYJL136C 264 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 73 ms