Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vamp8O70404 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.79□□□□□ -0.36
Vamp8O70404 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vamp8O70404 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vamp8O70404 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vamp8O70404 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC12.78□□□□□ -0.36
Vamp8O70404 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.78□□□□□ -0.36
Vamp8O70404 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.78□□□□□ -0.36
Vamp8O70404 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Vamp8O70404 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vamp8O70404 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vamp8O70404 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.78□□□□□ -0.36
Vamp8O70404 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vamp8O70404 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vamp8O70404 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vamp8O70404 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vamp8O70404 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vamp8O70404 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vamp8O70404 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Vamp8O70404 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vamp8O70404 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vamp8O70404 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vamp8O70404 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC12.77□□□□□ -0.37
Vamp8O70404 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vamp8O70404 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vamp8O70404 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.77□□□□□ -0.37
Vamp8O70404 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.76□□□□□ -0.37
Vamp8O70404 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.76□□□□□ -0.37
Vamp8O70404 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.76□□□□□ -0.37
Vamp8O70404 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vamp8O70404 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vamp8O70404 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vamp8O70404 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.75□□□□□ -0.37
Vamp8O70404 Gm7143-201ENSMUST00000222811 859 ntBASIC12.75□□□□□ -0.37
Vamp8O70404 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Vamp8O70404 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vamp8O70404 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.75□□□□□ -0.37
Vamp8O70404 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp8O70404 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp8O70404 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp8O70404 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp8O70404 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms