Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-4A0A0G2JFX3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-4A0A0G2JFX3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm38205-201ENSMUST00000192243 258 ntBASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm26833-201ENSMUST00000180899 440 ntBASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm12821-201ENSMUST00000120022 600 ntBASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms