Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Gm12251-201ENSMUST00000117893 792 ntBASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Smad6-203ENSMUST00000179458 273 ntBASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Gm8493-201ENSMUST00000196881 489 ntBASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-6A0A075B603 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-6A0A075B603 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Trav6-6A0A075B603 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav6-6A0A075B603 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-6A0A075B603 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-6A0A075B603 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-6A0A075B603 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-6A0A075B603 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Gm21956-201ENSMUST00000179946 522 ntBASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Gm27801-201ENSMUST00000184174 223 ntBASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6-6A0A075B603 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
Trav6-6A0A075B603 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms