Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.8□□□□□ -1
Usp47Q8BY87 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm24454-201ENSMUST00000083349 132 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usp47Q8BY87 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usp47Q8BY87 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usp47Q8BY87 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm9877-201ENSMUST00000064271 2627 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm43425-201ENSMUST00000201793 3291 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm12115-201ENSMUST00000119969 447 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Gm23225-201ENSMUST00000158121 114 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm27030-201ENSMUST00000182551 464 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm44225-201ENSMUST00000203582 186 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 AC155941.1-201ENSMUST00000220223 529 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Gm10095-201ENSMUST00000222765 483 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp47Q8BY87 AC120375.2-202ENSMUST00000228722 397 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm5436-201ENSMUST00000058103 643 ntBASIC8.79□□□□□ -1
Usp47Q8BY87 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp47Q8BY87 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Mir700-201ENSMUST00000102169 79 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC8.78□□□□□ -1
Usp47Q8BY87 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm26486-201ENSMUST00000158021 110 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Gm9597-201ENSMUST00000171913 602 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Mir6361-201ENSMUST00000185079 101 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Gm6631-201ENSMUST00000193699 559 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Trav3n-2-201ENSMUST00000197693 334 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Trav3d-2-201ENSMUST00000199874 334 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Gm5318-201ENSMUST00000205249 406 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm7802-201ENSMUST00000216464 262 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm24041-201ENSMUST00000083115 156 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC8.78□□□□□ -1
Usp47Q8BY87 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Usp47Q8BY87 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.78□□□□□ -1
Usp47Q8BY87 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.78□□□□□ -1
Usp47Q8BY87 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp47Q8BY87 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm28934-201ENSMUST00000186491 346 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm42886-201ENSMUST00000199214 466 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm44768-201ENSMUST00000205719 393 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm33178-201ENSMUST00000212090 257 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm45724-201ENSMUST00000213031 420 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm10221-201ENSMUST00000088299 309 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms