Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Clp1Q99LI9 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clp1Q99LI9 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm15422-201ENSMUST00000117453 541 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm15176-201ENSMUST00000117734 135 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm14335-201ENSMUST00000119165 810 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm5383-201ENSMUST00000121177 617 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm12369-201ENSMUST00000121343 942 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm13462-201ENSMUST00000121472 961 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm15696-201ENSMUST00000121730 445 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm2709-201ENSMUST00000142979 350 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Mir1929-201ENSMUST00000158635 93 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm25598-201ENSMUST00000179031 107 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm27186-201ENSMUST00000184223 307 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm27163-201ENSMUST00000184767 409 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm21524-201ENSMUST00000190499 696 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm37189-201ENSMUST00000192131 298 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm38068-201ENSMUST00000192546 540 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm43228-201ENSMUST00000200735 264 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm7452-201ENSMUST00000200764 788 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm18410-201ENSMUST00000207199 577 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm45279-201ENSMUST00000210315 391 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 AC161426.1-201ENSMUST00000214137 286 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 AC140209.1-204ENSMUST00000226736 739 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm24150-201ENSMUST00000082759 104 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm37010-201ENSMUST00000194539 1704 ntBASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.69□□□□□ -1.18
Clp1Q99LI9 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clp1Q99LI9 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.68□□□□□ -1.18
Clp1Q99LI9 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Clp1Q99LI9 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC7.68□□□□□ -1.18
Clp1Q99LI9 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Clp1Q99LI9 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Clp1Q99LI9 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Clp1Q99LI9 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms