Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm18805-201ENSMUST00000206872 655 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Gm5055-201ENSMUST00000215697 581 ntBASIC7.05□□□□□ -1.28
CiitaP79621 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.05□□□□□ -1.28
CiitaP79621 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Gm5341-201ENSMUST00000058881 489 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.05□□□□□ -1.28
CiitaP79621 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.04□□□□□ -1.28
CiitaP79621 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.04□□□□□ -1.28
CiitaP79621 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gm13604-201ENSMUST00000119332 482 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
CiitaP79621 Gm27348-201ENSMUST00000184511 170 ntBASIC7.04□□□□□ -1.28
CiitaP79621 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gm7492-201ENSMUST00000201745 725 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Gm45448-201ENSMUST00000211739 209 ntBASIC7.04□□□□□ -1.28
CiitaP79621 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.04□□□□□ -1.28
CiitaP79621 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.04□□□□□ -1.28
CiitaP79621 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.04□□□□□ -1.28
CiitaP79621 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.04□□□□□ -1.28
CiitaP79621 AC154368.2-201ENSMUST00000222334 1724 ntBASIC7.04□□□□□ -1.28
CiitaP79621 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CiitaP79621 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CiitaP79621 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CiitaP79621 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CiitaP79621 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CiitaP79621 Gm11498-201ENSMUST00000120660 949 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Gm27998-201ENSMUST00000184902 361 ntBASIC7.03□□□□□ -1.28
CiitaP79621 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Gm43850-201ENSMUST00000202021 578 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.03□□□□□ -1.28
CiitaP79621 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CiitaP79621 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CiitaP79621 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.03□□□□□ -1.28
CiitaP79621 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CiitaP79621 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
CiitaP79621 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.03□□□□□ -1.28
CiitaP79621 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.03□□□□□ -1.28
CiitaP79621 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms