Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm36930-201ENSMUST00000195431 2376 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm7337-202ENSMUST00000181439 2655 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm24888-201ENSMUST00000104387 130 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm15575-201ENSMUST00000119414 1581 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm12021-201ENSMUST00000121061 1746 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm37358-201ENSMUST00000195492 479 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm8863-201ENSMUST00000216630 926 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm37520-201ENSMUST00000194883 2672 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm24173-201ENSMUST00000104130 128 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm6181-201ENSMUST00000117187 264 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm8317-201ENSMUST00000121261 471 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm14038-201ENSMUST00000121500 807 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.4□□□□□ -1.54
Col6a4A2AX52 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Col6a4A2AX52 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a4A2AX52 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC5.4□□□□□ -1.55
Col6a4A2AX52 AC125409.2-201ENSMUST00000221888 2158 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 CR974429.2-201ENSMUST00000221883 1696 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a4A2AX52 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.4□□□□□ -1.55
Col6a4A2AX52 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm15715-201ENSMUST00000118032 283 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm25603-201ENSMUST00000158361 105 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm9529-201ENSMUST00000177598 579 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Mir6992-201ENSMUST00000183342 109 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm45850-201ENSMUST00000212536 338 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Col6a4A2AX52 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.4□□□□□ -1.55
Col6a4A2AX52 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm14202-201ENSMUST00000120121 311 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm11852-201ENSMUST00000120806 222 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms