Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RpgrQ9R0X5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Gm13534-201ENSMUST00000121169 513 ntBASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Gm7514-201ENSMUST00000209475 934 ntBASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.36■□□□□ 0.53
RpgrQ9R0X5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RpgrQ9R0X5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Gm10849-201ENSMUST00000100397 618 ntBASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RpgrQ9R0X5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RpgrQ9R0X5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.33■□□□□ 0.53
RpgrQ9R0X5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RpgrQ9R0X5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RpgrQ9R0X5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RpgrQ9R0X5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms