Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lonrf3Q9D4H7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lonrf3Q9D4H7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lonrf3Q9D4H7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lonrf3Q9D4H7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lonrf3Q9D4H7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Zfp783-201ENSMUST00000095946 670 ntBASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.98■□□□□ 0.95
Lonrf3Q9D4H7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Gm13158-201ENSMUST00000122007 736 ntBASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.97■□□□□ 0.95
Lonrf3Q9D4H7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lonrf3Q9D4H7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lonrf3Q9D4H7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lonrf3Q9D4H7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.96■□□□□ 0.95
Lonrf3Q9D4H7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lonrf3Q9D4H7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Lonrf3Q9D4H7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Lonrf3Q9D4H7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Gm10252-201ENSMUST00000209541 832 ntBASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lonrf3Q9D4H7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lonrf3Q9D4H7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Fst-202ENSMUST00000223640 2612 ntBASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Gm18666-201ENSMUST00000190039 958 ntBASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lonrf3Q9D4H7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lonrf3Q9D4H7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lonrf3Q9D4H7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lonrf3Q9D4H7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Lonrf3Q9D4H7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lonrf3Q9D4H7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lonrf3Q9D4H7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms