Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Gm10698-201ENSMUST00000182663 604 ntBASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61bQ9CQS8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Sec61bQ9CQS8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Gm37055-201ENSMUST00000191866 133 ntBASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Gm7977-201ENSMUST00000193787 748 ntBASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Gm10138-203ENSMUST00000206952 366 ntBASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61bQ9CQS8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Alkbh1-212ENSMUST00000185301 408 ntBASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Sec61bQ9CQS8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms