Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf111Q99ML9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf111Q99ML9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf111Q99ML9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf111Q99ML9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf111Q99ML9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf111Q99ML9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf111Q99ML9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.53■□□□□ 0.4
Rnf111Q99ML9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.52■□□□□ 0.4
Rnf111Q99ML9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms