Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC120498.10-201ENST00000621827 505 ntBASIC18.88■□□□□ 0.61
NPAS1Q99742 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NPAS1Q99742 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS1Q99742 RBM17P2-201ENST00000616397 1405 ntBASIC18.88■□□□□ 0.61
NPAS1Q99742 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS1Q99742 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
NPAS1Q99742 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NPAS1Q99742 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NPAS1Q99742 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 AL049796.1-201ENST00000565336 1766 ntBASIC18.87■□□□□ 0.61
NPAS1Q99742 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.87■□□□□ 0.61
NPAS1Q99742 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.87■□□□□ 0.61
NPAS1Q99742 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.87■□□□□ 0.61
NPAS1Q99742 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS1Q99742 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS1Q99742 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPAS1Q99742 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS1Q99742 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NPAS1Q99742 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS1Q99742 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS1Q99742 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS1Q99742 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS1Q99742 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS1Q99742 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS1Q99742 KRT18P11-201ENST00000435214 1283 ntBASIC18.86■□□□□ 0.61
NPAS1Q99742 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS1Q99742 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NPAS1Q99742 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.86■□□□□ 0.61
NPAS1Q99742 AC080038.1-201ENST00000611274 1154 ntBASIC18.86■□□□□ 0.61
NPAS1Q99742 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NPAS1Q99742 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPAS1Q99742 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NPAS1Q99742 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NPAS1Q99742 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 CNN2P6-201ENST00000439038 900 ntBASIC18.85■□□□□ 0.61
NPAS1Q99742 CDCA4P2-201ENST00000441182 718 ntBASIC18.85■□□□□ 0.61
NPAS1Q99742 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 AC073111.5-205ENST00000641717 521 ntBASIC18.85■□□□□ 0.61
NPAS1Q99742 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
NPAS1Q99742 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS1Q99742 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS1Q99742 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS1Q99742 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS1Q99742 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS1Q99742 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
NPAS1Q99742 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS1Q99742 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 RAP2CP1-201ENST00000605103 478 ntBASIC18.84■□□□□ 0.61
NPAS1Q99742 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS1Q99742 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS1Q99742 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS1Q99742 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS1Q99742 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NPAS1Q99742 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS1Q99742 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
NPAS1Q99742 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.83■□□□□ 0.6
NPAS1Q99742 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS1Q99742 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS1Q99742 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS1Q99742 TERF1P5-201ENST00000477545 1207 ntBASIC18.83■□□□□ 0.6
NPAS1Q99742 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms