Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAF3IP1Q8TDR0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRAF3IP1Q8TDR0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRAF3IP1Q8TDR0 AC006128.1-201ENST00000624704 1661 ntBASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP1Q8TDR0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 TERF1P2-201ENST00000583350 1212 ntBASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 PLK5-205ENST00000642079 1969 ntBASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP1Q8TDR0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 CCDC92B-201ENST00000575506 885 ntBASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 AC104187.1-201ENST00000607510 612 ntBASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.52■■□□□ 1.04
TRAF3IP1Q8TDR0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TRAF3IP1Q8TDR0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TRAF3IP1Q8TDR0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TRAF3IP1Q8TDR0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAF3IP1Q8TDR0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 AC010141.2-201ENST00000452426 721 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 KRT18P14-201ENST00000534205 1250 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L2-201ENST00000561772 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L6-201ENST00000626483 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L1-201ENST00000627662 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L8-201ENST00000629013 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L3-201ENST00000630187 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L7-201ENST00000630678 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 DUX4L5-201ENST00000630834 1275 ntBASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP1Q8TDR0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms