Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln1Q8R317 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln1Q8R317 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln1Q8R317 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ubqln1Q8R317 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ubqln1Q8R317 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln1Q8R317 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln1Q8R317 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln1Q8R317 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms