Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc40Q8BI79 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc40Q8BI79 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc40Q8BI79 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Gm7514-201ENSMUST00000209475 934 ntBASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc40Q8BI79 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc40Q8BI79 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.83■□□□□ 0.61
Ccdc40Q8BI79 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 AV356131-201ENSMUST00000206201 750 ntBASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc40Q8BI79 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc40Q8BI79 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms