Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Gm2399-201ENSMUST00000104944 225 ntBASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Gm12896-201ENSMUST00000118430 226 ntBASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Gm10812-201ENSMUST00000099864 546 ntBASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl3Q6P1Y1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl3Q6P1Y1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Gm27275-201ENSMUST00000184318 272 ntBASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl3Q6P1Y1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl3Q6P1Y1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl3Q6P1Y1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl3Q6P1Y1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtl3Q6P1Y1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rtl3Q6P1Y1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.69■□□□□ 0.58
Rtl3Q6P1Y1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtl3Q6P1Y1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.69■□□□□ 0.58
Rtl3Q6P1Y1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rtl3Q6P1Y1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms