Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxc2Q61850 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.29□□□□□ -0.12
Foxc2Q61850 Gm29257-201ENSMUST00000186115 639 ntBASIC14.29□□□□□ -0.12
Foxc2Q61850 Gm10602-201ENSMUST00000098239 609 ntBASIC14.29□□□□□ -0.12
Foxc2Q61850 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Foxc2Q61850 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Foxc2Q61850 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc2Q61850 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Foxc2Q61850 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.28□□□□□ -0.12
Foxc2Q61850 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxc2Q61850 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.28□□□□□ -0.12
Foxc2Q61850 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.28□□□□□ -0.12
Foxc2Q61850 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.28□□□□□ -0.12
Foxc2Q61850 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxc2Q61850 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.28□□□□□ -0.12
Foxc2Q61850 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Foxc2Q61850 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Gm6365-201ENSMUST00000054711 744 ntBASIC14.28□□□□□ -0.12
Foxc2Q61850 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Foxc2Q61850 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxc2Q61850 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc2Q61850 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.27□□□□□ -0.12
Foxc2Q61850 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Foxc2Q61850 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc2Q61850 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Foxc2Q61850 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.27□□□□□ -0.13
Foxc2Q61850 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc2Q61850 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.27□□□□□ -0.13
Foxc2Q61850 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc2Q61850 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Foxc2Q61850 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Foxc2Q61850 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Foxc2Q61850 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Foxc2Q61850 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.26□□□□□ -0.13
Foxc2Q61850 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc2Q61850 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxc2Q61850 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc2Q61850 Gm12933-201ENSMUST00000120203 872 ntBASIC14.25□□□□□ -0.13
Foxc2Q61850 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Foxc2Q61850 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Foxc2Q61850 Mir5133-201ENSMUST00000174955 77 ntBASIC14.25□□□□□ -0.13
Foxc2Q61850 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.25□□□□□ -0.13
Foxc2Q61850 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms