Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.04□□□□□ -0.16
Vamp3P63024 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Vamp3P63024 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp3P63024 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp3P63024 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp3P63024 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vamp3P63024 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vamp3P63024 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp3P63024 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp3P63024 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp3P63024 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp3P63024 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp3P63024 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp3P63024 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vamp3P63024 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.02□□□□□ -0.16
Vamp3P63024 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Vamp3P63024 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp3P63024 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Vamp3P63024 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp3P63024 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp3P63024 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Vamp3P63024 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp3P63024 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.02□□□□□ -0.17
Vamp3P63024 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp3P63024 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vamp3P63024 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vamp3P63024 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vamp3P63024 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vamp3P63024 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vamp3P63024 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Vamp3P63024 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Vamp3P63024 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vamp3P63024 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14□□□□□ -0.17
Vamp3P63024 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vamp3P63024 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vamp3P63024 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vamp3P63024 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vamp3P63024 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp3P63024 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.99□□□□□ -0.17
Vamp3P63024 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.99□□□□□ -0.17
Vamp3P63024 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vamp3P63024 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp3P63024 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms