Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox2P48432 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Gm38205-201ENSMUST00000192243 258 ntBASIC17.01■□□□□ 0.31
Sox2P48432 Gm43173-201ENSMUST00000202246 593 ntBASIC17.01■□□□□ 0.31
Sox2P48432 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sox2P48432 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox2P48432 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sox2P48432 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox2P48432 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox2P48432 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sox2P48432 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17■□□□□ 0.31
Sox2P48432 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox2P48432 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17■□□□□ 0.31
Sox2P48432 Gm37805-201ENSMUST00000192612 1094 ntBASIC17■□□□□ 0.31
Sox2P48432 Wdr70-203ENSMUST00000227371 1130 ntBASIC17■□□□□ 0.31
Sox2P48432 Gm37194-201ENSMUST00000193092 3031 ntBASIC17■□□□□ 0.31
Sox2P48432 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox2P48432 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox2P48432 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox2P48432 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox2P48432 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17■□□□□ 0.31
Sox2P48432 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox2P48432 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox2P48432 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox2P48432 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Sox2P48432 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox2P48432 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox2P48432 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.99■□□□□ 0.31
Sox2P48432 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox2P48432 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox2P48432 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox2P48432 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sox2P48432 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox2P48432 Gm8493-201ENSMUST00000196881 489 ntBASIC16.98■□□□□ 0.31
Sox2P48432 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.98■□□□□ 0.31
Sox2P48432 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.98■□□□□ 0.31
Sox2P48432 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Sox2P48432 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox2P48432 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sox2P48432 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox2P48432 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sox2P48432 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.97■□□□□ 0.31
Sox2P48432 Gm21956-201ENSMUST00000179946 522 ntBASIC16.97■□□□□ 0.31
Sox2P48432 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox2P48432 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Sox2P48432 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.97■□□□□ 0.31
Sox2P48432 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox2P48432 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.97■□□□□ 0.31
Sox2P48432 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.96■□□□□ 0.31
Sox2P48432 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox2P48432 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.96■□□□□ 0.31
Sox2P48432 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox2P48432 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms