Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.35■□□□□ 0.37
Cdh4P39038 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdh4P39038 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cdh4P39038 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdh4P39038 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdh4P39038 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh4P39038 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh4P39038 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh4P39038 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cdh4P39038 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh4P39038 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh4P39038 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh4P39038 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdh4P39038 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh4P39038 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh4P39038 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh4P39038 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdh4P39038 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh4P39038 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdh4P39038 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdh4P39038 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdh4P39038 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdh4P39038 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.32■□□□□ 0.36
Cdh4P39038 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.32■□□□□ 0.36
Cdh4P39038 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.32■□□□□ 0.36
Cdh4P39038 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Cdh4P39038 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh4P39038 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.31■□□□□ 0.36
Cdh4P39038 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh4P39038 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Gm2399-201ENSMUST00000104944 225 ntBASIC17.31■□□□□ 0.36
Cdh4P39038 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdh4P39038 Gm2559-201ENSMUST00000201323 363 ntBASIC17.31■□□□□ 0.36
Cdh4P39038 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cdh4P39038 Gm20049-201ENSMUST00000219950 730 ntBASIC17.31■□□□□ 0.36
Cdh4P39038 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh4P39038 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh4P39038 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh4P39038 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdh4P39038 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cdh4P39038 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.3■□□□□ 0.36
Cdh4P39038 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cdh4P39038 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh4P39038 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh4P39038 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdh4P39038 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdh4P39038 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Cdh4P39038 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cdh4P39038 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdh4P39038 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms