Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc6a11P31650 Reep4-203ENSMUST00000226563 1444 ntBASIC17.19■□□□□ 0.34
Slc6a11P31650 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.18■□□□□ 0.34
Slc6a11P31650 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a11P31650 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a11P31650 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.17■□□□□ 0.34
Slc6a11P31650 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Slc6a11P31650 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Gm10653-202ENSMUST00000139570 835 ntBASIC17.17■□□□□ 0.34
Slc6a11P31650 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a11P31650 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Gm38205-201ENSMUST00000192243 258 ntBASIC17.17■□□□□ 0.34
Slc6a11P31650 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a11P31650 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a11P31650 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a11P31650 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a11P31650 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a11P31650 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a11P31650 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a11P31650 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a11P31650 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc6a11P31650 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a11P31650 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a11P31650 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a11P31650 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Slc6a11P31650 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Gm20760-201ENSMUST00000179197 648 ntBASIC17.15■□□□□ 0.34
Slc6a11P31650 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.15■□□□□ 0.34
Slc6a11P31650 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.15■□□□□ 0.34
Slc6a11P31650 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.15■□□□□ 0.34
Slc6a11P31650 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.15■□□□□ 0.34
Slc6a11P31650 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a11P31650 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc6a11P31650 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.14■□□□□ 0.33
Slc6a11P31650 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a11P31650 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc6a11P31650 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.14■□□□□ 0.33
Slc6a11P31650 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Slc6a11P31650 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Gm22240-201ENSMUST00000175225 82 ntBASIC17.14■□□□□ 0.33
Slc6a11P31650 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc6a11P31650 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a11P31650 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a11P31650 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a11P31650 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms