Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HTR1EP28566 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HTR1EP28566 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HTR1EP28566 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.83■□□□□ 0.76
HTR1EP28566 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.82■□□□□ 0.76
HTR1EP28566 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
HTR1EP28566 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.82■□□□□ 0.76
HTR1EP28566 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.82■□□□□ 0.76
HTR1EP28566 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.82■□□□□ 0.76
HTR1EP28566 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.82■□□□□ 0.76
HTR1EP28566 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HTR1EP28566 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTR1EP28566 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.81■□□□□ 0.76
HTR1EP28566 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.81■□□□□ 0.76
HTR1EP28566 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.81■□□□□ 0.76
HTR1EP28566 HLA-L-209ENST00000420110 1011 ntBASIC19.81■□□□□ 0.76
HTR1EP28566 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.81■□□□□ 0.76
HTR1EP28566 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.81■□□□□ 0.76
HTR1EP28566 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTR1EP28566 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HTR1EP28566 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.8■□□□□ 0.76
HTR1EP28566 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.8■□□□□ 0.76
HTR1EP28566 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HTR1EP28566 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.8■□□□□ 0.76
HTR1EP28566 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.8■□□□□ 0.76
HTR1EP28566 KRT18P14-201ENST00000534205 1250 ntBASIC19.8■□□□□ 0.76
HTR1EP28566 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.8■□□□□ 0.76
HTR1EP28566 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
HTR1EP28566 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTR1EP28566 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
HTR1EP28566 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTR1EP28566 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTR1EP28566 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTR1EP28566 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.79■□□□□ 0.76
HTR1EP28566 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTR1EP28566 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTR1EP28566 AC010525.1-201ENST00000585559 441 ntBASIC19.79■□□□□ 0.76
HTR1EP28566 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
HTR1EP28566 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
HTR1EP28566 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTR1EP28566 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HTR1EP28566 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.79■□□□□ 0.76
HTR1EP28566 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.79■□□□□ 0.76
HTR1EP28566 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.78■□□□□ 0.76
HTR1EP28566 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HTR1EP28566 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.78■□□□□ 0.76
HTR1EP28566 AP006587.3-201ENST00000525742 1516 ntBASIC19.78■□□□□ 0.76
HTR1EP28566 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HTR1EP28566 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HTR1EP28566 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.78■□□□□ 0.76
HTR1EP28566 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.78■□□□□ 0.76
HTR1EP28566 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.78■□□□□ 0.76
HTR1EP28566 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.78■□□□□ 0.76
HTR1EP28566 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HTR1EP28566 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTR1EP28566 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HTR1EP28566 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTR1EP28566 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HTR1EP28566 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.77■□□□□ 0.76
HTR1EP28566 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.77■□□□□ 0.76
HTR1EP28566 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HTR1EP28566 AC007952.6-201ENST00000573168 2673 ntBASIC19.77■□□□□ 0.76
HTR1EP28566 AC003957.1-201ENST00000625108 2673 ntBASIC19.77■□□□□ 0.76
HTR1EP28566 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.77■□□□□ 0.76
HTR1EP28566 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HTR1EP28566 LINC02228-203ENST00000641970 1355 ntBASIC19.77■□□□□ 0.76
HTR1EP28566 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HTR1EP28566 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
HTR1EP28566 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms