Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd48P18181 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd48P18181 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Cd48P18181 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.28■□□□□ 0.2
Cd48P18181 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cd48P18181 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cd48P18181 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd48P18181 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd48P18181 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd48P18181 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd48P18181 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cd48P18181 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd48P18181 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd48P18181 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.27■□□□□ 0.2
Cd48P18181 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.27■□□□□ 0.2
Cd48P18181 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd48P18181 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Cd48P18181 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd48P18181 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd48P18181 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd48P18181 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd48P18181 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Cd48P18181 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.26■□□□□ 0.19
Cd48P18181 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cd48P18181 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cd48P18181 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.26■□□□□ 0.19
Cd48P18181 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd48P18181 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.25■□□□□ 0.19
Cd48P18181 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
Cd48P18181 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.25■□□□□ 0.19
Cd48P18181 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Gm13146-201ENSMUST00000118508 780 ntBASIC16.25■□□□□ 0.19
Cd48P18181 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.25■□□□□ 0.19
Cd48P18181 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.25■□□□□ 0.19
Cd48P18181 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd48P18181 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd48P18181 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd48P18181 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd48P18181 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.24■□□□□ 0.19
Cd48P18181 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.24■□□□□ 0.19
Cd48P18181 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd48P18181 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd48P18181 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd48P18181 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd48P18181 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Cd48P18181 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd48P18181 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms