Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.55■□□□□ 0.08
H3f3cP02301 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
H3f3cP02301 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H3f3cP02301 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
H3f3cP02301 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
H3f3cP02301 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H3f3cP02301 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
H3f3cP02301 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H3f3cP02301 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H3f3cP02301 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.55■□□□□ 0.08
H3f3cP02301 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.55■□□□□ 0.08
H3f3cP02301 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H3f3cP02301 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Gm10602-201ENSMUST00000098239 609 ntBASIC15.54■□□□□ 0.08
H3f3cP02301 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H3f3cP02301 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
H3f3cP02301 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
H3f3cP02301 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
H3f3cP02301 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H3f3cP02301 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.53■□□□□ 0.08
H3f3cP02301 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.53■□□□□ 0.08
H3f3cP02301 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.53■□□□□ 0.08
H3f3cP02301 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
H3f3cP02301 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H3f3cP02301 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H3f3cP02301 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H3f3cP02301 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
H3f3cP02301 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.52■□□□□ 0.08
H3f3cP02301 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H3f3cP02301 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H3f3cP02301 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
H3f3cP02301 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.52■□□□□ 0.08
H3f3cP02301 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
H3f3cP02301 Gm26524-201ENSMUST00000192339 390 ntBASIC15.52■□□□□ 0.08
H3f3cP02301 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
H3f3cP02301 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
H3f3cP02301 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H3f3cP02301 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
H3f3cP02301 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H3f3cP02301 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.52■□□□□ 0.07
H3f3cP02301 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H3f3cP02301 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H3f3cP02301 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.52■□□□□ 0.07
H3f3cP02301 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
H3f3cP02301 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.51■□□□□ 0.07
H3f3cP02301 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
H3f3cP02301 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
H3f3cP02301 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.51■□□□□ 0.07
H3f3cP02301 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H3f3cP02301 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.51■□□□□ 0.07
H3f3cP02301 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.51■□□□□ 0.07
H3f3cP02301 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H3f3cP02301 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.5■□□□□ 0.07
H3f3cP02301 Gm22325-201ENSMUST00000158904 308 ntBASIC15.5■□□□□ 0.07
H3f3cP02301 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms