Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.46■□□□□ 0.87
IFRD1O00458 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.46■□□□□ 0.87
IFRD1O00458 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.46■□□□□ 0.87
IFRD1O00458 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
IFRD1O00458 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.46■□□□□ 0.87
IFRD1O00458 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.46■□□□□ 0.87
IFRD1O00458 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.46■□□□□ 0.87
IFRD1O00458 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
IFRD1O00458 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.46■□□□□ 0.87
IFRD1O00458 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFRD1O00458 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
IFRD1O00458 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.45■□□□□ 0.86
IFRD1O00458 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.45■□□□□ 0.86
IFRD1O00458 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.45■□□□□ 0.86
IFRD1O00458 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.45■□□□□ 0.86
IFRD1O00458 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.45■□□□□ 0.86
IFRD1O00458 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.45■□□□□ 0.86
IFRD1O00458 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
IFRD1O00458 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.45■□□□□ 0.86
IFRD1O00458 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.45■□□□□ 0.86
IFRD1O00458 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.45■□□□□ 0.86
IFRD1O00458 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFRD1O00458 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
IFRD1O00458 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.44■□□□□ 0.86
IFRD1O00458 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.44■□□□□ 0.86
IFRD1O00458 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IFRD1O00458 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.44■□□□□ 0.86
IFRD1O00458 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.44■□□□□ 0.86
IFRD1O00458 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.43■□□□□ 0.86
IFRD1O00458 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.43■□□□□ 0.86
IFRD1O00458 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.43■□□□□ 0.86
IFRD1O00458 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.43■□□□□ 0.86
IFRD1O00458 MFSD11-216ENST00000590393 1141 ntBASIC20.43■□□□□ 0.86
IFRD1O00458 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
IFRD1O00458 AC080038.1-201ENST00000611274 1154 ntBASIC20.43■□□□□ 0.86
IFRD1O00458 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.43■□□□□ 0.86
IFRD1O00458 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
IFRD1O00458 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.43■□□□□ 0.86
IFRD1O00458 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IFRD1O00458 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
IFRD1O00458 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
IFRD1O00458 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IFRD1O00458 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IFRD1O00458 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IFRD1O00458 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
IFRD1O00458 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
IFRD1O00458 AC245052.3-201ENST00000450182 901 ntBASIC20.42■□□□□ 0.86
IFRD1O00458 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.42■□□□□ 0.86
IFRD1O00458 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.42■□□□□ 0.86
IFRD1O00458 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
IFRD1O00458 AC010536.3-201ENST00000620306 533 ntBASIC20.42■□□□□ 0.86
IFRD1O00458 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
IFRD1O00458 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
IFRD1O00458 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.42■□□□□ 0.86
IFRD1O00458 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IFRD1O00458 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IFRD1O00458 AF106564.1-201ENST00000607058 2553 ntBASIC20.41■□□□□ 0.86
IFRD1O00458 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.41■□□□□ 0.86
IFRD1O00458 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
IFRD1O00458 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
IFRD1O00458 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.41■□□□□ 0.86
IFRD1O00458 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms