Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm5921-201ENSMUST00000075898 882 ntBASIC16.48■□□□□ 0.23
Smim17A0A504 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim17A0A504 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim17A0A504 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smim17A0A504 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim17A0A504 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim17A0A504 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim17A0A504 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smim17A0A504 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smim17A0A504 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smim17A0A504 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.47■□□□□ 0.23
Smim17A0A504 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.47■□□□□ 0.23
Smim17A0A504 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smim17A0A504 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smim17A0A504 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim17A0A504 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.47■□□□□ 0.23
Smim17A0A504 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Smim17A0A504 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Smim17A0A504 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.46■□□□□ 0.23
Smim17A0A504 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim17A0A504 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smim17A0A504 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smim17A0A504 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smim17A0A504 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smim17A0A504 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smim17A0A504 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smim17A0A504 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Gm10232-201ENSMUST00000089221 720 ntBASIC16.45■□□□□ 0.22
Smim17A0A504 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.45■□□□□ 0.22
Smim17A0A504 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smim17A0A504 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smim17A0A504 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.44■□□□□ 0.22
Smim17A0A504 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smim17A0A504 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smim17A0A504 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Smim17A0A504 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.44■□□□□ 0.22
Smim17A0A504 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim17A0A504 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.43■□□□□ 0.22
Smim17A0A504 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.43■□□□□ 0.22
Smim17A0A504 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.43■□□□□ 0.22
Smim17A0A504 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smim17A0A504 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.43■□□□□ 0.22
Smim17A0A504 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Smim17A0A504 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.43■□□□□ 0.22
Smim17A0A504 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim17A0A504 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smim17A0A504 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smim17A0A504 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smim17A0A504 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms