Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gm14117-201ENSMUST00000122417 843 ntBASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-4A0A140T8Q4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-4A0A140T8Q4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Igkv3-4A0A140T8Q4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms