Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav17A0A075B655 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.41□□□□□ -0.1
Trav17A0A075B655 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.41□□□□□ -0.1
Trav17A0A075B655 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav17A0A075B655 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav17A0A075B655 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.39□□□□□ -0.11
Trav17A0A075B655 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav17A0A075B655 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.38□□□□□ -0.11
Trav17A0A075B655 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.38□□□□□ -0.11
Trav17A0A075B655 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav17A0A075B655 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms