Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm6061-201ENSMUST00000175860 492 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm20778-201ENSMUST00000178524 627 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Mir3473e-201ENSMUST00000183932 110 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm18103-201ENSMUST00000216621 779 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm15732-201ENSMUST00000079794 480 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 n-R5s56-201ENSMUST00000082521 105 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm18716-201ENSMUST00000204507 1603 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm44898-201ENSMUST00000205934 2223 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm13835-201ENSMUST00000118459 685 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm14796-201ENSMUST00000121216 959 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Calr-ps-201ENSMUST00000121776 485 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm23632-201ENSMUST00000175289 125 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Mir5107-201ENSMUST00000175586 88 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm27602-201ENSMUST00000183861 111 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm18700-201ENSMUST00000185791 553 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm8641-201ENSMUST00000186995 826 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm42799-201ENSMUST00000201331 328 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm44237-201ENSMUST00000205183 936 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 AC116589.4-201ENSMUST00000222390 216 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 AC158521.1-202ENSMUST00000224352 645 ntBASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Usp40Q8BWR4 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm15719-201ENSMUST00000120619 635 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm25387-201ENSMUST00000157813 132 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm23896-201ENSMUST00000158109 130 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm17048-201ENSMUST00000179266 847 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm28941-201ENSMUST00000185536 1017 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm29755-201ENSMUST00000196976 948 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms