Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 AC007322.3-201ENST00000426526 701 ntBASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTFDC1Q9BY42 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.44■■□□□ 1.66
RTFDC1Q9BY42 AC026471.6-201ENST00000622954 1905 ntBASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
RTFDC1Q9BY42 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 CYP21A1P-202ENST00000354927 1481 ntBASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.42■■□□□ 1.66
RTFDC1Q9BY42 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 POM121L13P-201ENST00000422362 380 ntBASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTFDC1Q9BY42 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTFDC1Q9BY42 SNORA78-201ENST00000459373 127 ntBASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms