Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 AC010542.4-201ENST00000563151 1910 ntBASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 FBXW4P1-201ENST00000426721 2239 ntBASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 MFSD11-216ENST00000590393 1141 ntBASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 MYCNOS-205ENST00000641950 531 ntBASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCGF1Q9BSM1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 AC006970.2-201ENST00000450065 779 ntBASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF1Q9BSM1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 AC003102.1-202ENST00000563394 1796 ntBASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 AC008175.2-201ENST00000612840 297 ntBASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 AC244015.2-201ENST00000616358 1861 ntBASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 AC120498.10-201ENST00000621827 505 ntBASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCGF1Q9BSM1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF1Q9BSM1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms