Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf8Q8VC56 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 AV356131-201ENSMUST00000206201 750 ntBASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf8Q8VC56 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Gm42569-201ENSMUST00000200539 472 ntBASIC17.5■□□□□ 0.39
Rnf8Q8VC56 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf8Q8VC56 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Rnf8Q8VC56 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Gm27405-201ENSMUST00000184201 112 ntBASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf8Q8VC56 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf8Q8VC56 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf8Q8VC56 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms