Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Gm7290-201ENSMUST00000104990 617 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Gm12918-201ENSMUST00000120234 636 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Gm15710-201ENSMUST00000121821 636 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Gm5075-201ENSMUST00000196916 622 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Gm6365-201ENSMUST00000054711 744 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim31Q8R0K2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim31Q8R0K2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.74■□□□□ 0.43
Trim31Q8R0K2 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.74■□□□□ 0.43
Trim31Q8R0K2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim31Q8R0K2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim31Q8R0K2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim31Q8R0K2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim31Q8R0K2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim31Q8R0K2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms