Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb7Q8CDY9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb7Q8CDY9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb7Q8CDY9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb7Q8CDY9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb7Q8CDY9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb7Q8CDY9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb7Q8CDY9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb7Q8CDY9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb7Q8CDY9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 AV356131-201ENSMUST00000206201 750 ntBASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhb7Q8CDY9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb7Q8CDY9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms