Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lysmd4Q8CC84 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Gm38205-201ENSMUST00000192243 258 ntBASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Gm43173-201ENSMUST00000202246 593 ntBASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.33■□□□□ 0.2
Lysmd4Q8CC84 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd4Q8CC84 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lysmd4Q8CC84 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd4Q8CC84 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Gm12821-201ENSMUST00000120022 600 ntBASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms