Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smco3Q8BQM7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smco3Q8BQM7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Serp2-204ENSMUST00000228055 705 ntBASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smco3Q8BQM7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15□□□□□ -0.01
Smco3Q8BQM7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Smco3Q8BQM7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15□□□□□ -0.01
Smco3Q8BQM7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smco3Q8BQM7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smco3Q8BQM7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smco3Q8BQM7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms