Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 VEL1YGL258W 621 nt2.78□□□□□ -1.96
SSN8P47821 THG1YGR024C 714 nt2.78□□□□□ -1.96
SSN8P47821 YIR020C-BYIR020C-B 735 nt2.78□□□□□ -1.96
SSN8P47821 AIM26YKL037W 357 nt2.78□□□□□ -1.96
SSN8P47821 RCN2YOR220W 798 nt2.78□□□□□ -1.96
SSN8P47821 MEI5YPL121C 669 nt2.78□□□□□ -1.96
SSN8P47821 SEC66YBR171W 621 nt2.78□□□□□ -1.96
SSN8P47821 TAF2YCR042C 4224 nt2.78□□□□□ -1.96
SSN8P47821 ICR1ICR1 3199 nt2.77□□□□□ -1.97
SSN8P47821 YFL002W-BYFL002W-B 1317 nt2.77□□□□□ -1.97
SSN8P47821 YGR161W-AYGR161W-A 1317 nt2.77□□□□□ -1.97
SSN8P47821 YLR446WYLR446W 1302 nt2.77□□□□□ -1.97
SSN8P47821 YBL100W-AYBL100W-A 1317 nt2.77□□□□□ -1.97
SSN8P47821 YCL020WYCL020W 1317 nt2.77□□□□□ -1.97
SSN8P47821 YDL016CYDL016C 303 nt2.77□□□□□ -1.97
SSN8P47821 YGR109W-AYGR109W-A 873 nt2.77□□□□□ -1.97
SSN8P47821 YIL082WYIL082W 873 nt2.77□□□□□ -1.97
SSN8P47821 SDL1YIL167W 633 nt2.77□□□□□ -1.97
SSN8P47821 SRP21YKL122C 504 nt2.77□□□□□ -1.97
SSN8P47821 GMC2YLR445W 567 nt2.77□□□□□ -1.97
SSN8P47821 INP1YMR204C 1263 nt2.77□□□□□ -1.97
SSN8P47821 YDR061WYDR061W 1620 nt2.77□□□□□ -1.97
SSN8P47821 YLR278CYLR278C 4026 nt2.77□□□□□ -1.97
SSN8P47821 CTF13YMR094W 1437 nt2.76□□□□□ -1.97
SSN8P47821 BNI4YNL233W 2679 nt2.76□□□□□ -1.97
SSN8P47821 TFC4YGR047C 3078 nt2.76□□□□□ -1.97
SSN8P47821 YER091C-AYER091C-A 222 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)DtK(UUU)D 73 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)G1tK(UUU)G1 73 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)G2tK(UUU)G2 73 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)KtK(UUU)K 73 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)LtK(UUU)L 73 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)OtK(UUU)O 73 nt2.76□□□□□ -1.97
SSN8P47821 tK(UUU)PtK(UUU)P 73 nt2.76□□□□□ -1.97
SSN8P47821 RLP24YLR009W 600 nt2.76□□□□□ -1.97
SSN8P47821 YLR076CYLR076C 423 nt2.76□□□□□ -1.97
SSN8P47821 ADI1YMR009W 540 nt2.76□□□□□ -1.97
SSN8P47821 MPP6YNR024W 561 nt2.76□□□□□ -1.97
SSN8P47821 RBL2YOR265W 321 nt2.76□□□□□ -1.97
SSN8P47821 YPL068CYPL068C 882 nt2.76□□□□□ -1.97
SSN8P47821 CSM4YPL200W 471 nt2.76□□□□□ -1.97
SSN8P47821 MBA1YBR185C 837 nt2.76□□□□□ -1.97
SSN8P47821 CDC20YGL116W 1833 nt2.76□□□□□ -1.97
SSN8P47821 STI1YOR027W 1770 nt2.76□□□□□ -1.97
SSN8P47821 NCS2YNL119W 1482 nt2.76□□□□□ -1.97
SSN8P47821 YDR133CYDR133C 336 nt2.75□□□□□ -1.97
SSN8P47821 YER066C-AYER066C-A 501 nt2.75□□□□□ -1.97
SSN8P47821 MIC19YFR011C 513 nt2.75□□□□□ -1.97
SSN8P47821 YHR213WYHR213W 597 nt2.75□□□□□ -1.97
SSN8P47821 TDA8YAL064C-A 381 nt2.75□□□□□ -1.97
SSN8P47821 YAR062WYAR062W 597 nt2.75□□□□□ -1.97
SSN8P47821 PAI3YMR174C 207 nt2.75□□□□□ -1.97
SSN8P47821 YMR294W-AYMR294W-A 360 nt2.75□□□□□ -1.97
SSN8P47821 RIM13YMR154C 2184 nt2.75□□□□□ -1.97
SSN8P47821 DIA2YOR080W 2199 nt2.75□□□□□ -1.97
SSN8P47821 MMS1YPR164W 4224 nt2.75□□□□□ -1.97
SSN8P47821 STN1YDR082W 1485 nt2.75□□□□□ -1.97
SSN8P47821 SWC4YGR002C 1431 nt2.75□□□□□ -1.97
SSN8P47821 DYN1YKR054C 12279 nt2.74□□□□□ -1.97
SSN8P47821 CAF120YNL278W 3183 nt2.74□□□□□ -1.97
SSN8P47821 MET10YFR030W 3108 nt2.74□□□□□ -1.97
SSN8P47821 CHS2YBR038W 2892 nt2.74□□□□□ -1.97
SSN8P47821 EXO84YBR102C 2262 nt2.74□□□□□ -1.97
SSN8P47821 FRE8YLR047C 2061 nt2.74□□□□□ -1.97
SSN8P47821 TDA2YER071C 381 nt2.74□□□□□ -1.97
SSN8P47821 FAR7YFR008W 666 nt2.74□□□□□ -1.97
SSN8P47821 VMA21YGR105W 234 nt2.74□□□□□ -1.97
SSN8P47821 CWC24YLR323C 780 nt2.74□□□□□ -1.97
SSN8P47821 NIP7YPL211W 546 nt2.74□□□□□ -1.97
SSN8P47821 MET5YJR137C 4329 nt2.74□□□□□ -1.97
SSN8P47821 YBR259WYBR259W 2067 nt2.73□□□□□ -1.97
SSN8P47821 YCR045W-AYCR045W-A 351 nt2.73□□□□□ -1.97
SSN8P47821 FMP32YFL046W 624 nt2.73□□□□□ -1.97
SSN8P47821 SRL3YKR091W 741 nt2.73□□□□□ -1.97
SSN8P47821 PDC2YDR081C 2778 nt2.73□□□□□ -1.97
SSN8P47821 MAL33YBR297W 1407 nt2.73□□□□□ -1.97
SSN8P47821 NEL1YHR035W 1893 nt2.73□□□□□ -1.97
SSN8P47821 UTP15YMR093W 1542 nt2.73□□□□□ -1.97
SSN8P47821 PRP8YHR165C 7242 nt2.72□□□□□ -1.97
SSN8P47821 PCI8YIL071C 1335 nt2.72□□□□□ -1.97
SSN8P47821 CWH41YGL027C 2502 nt2.72□□□□□ -1.97
SSN8P47821 HBT1YDL223C 3141 nt2.72□□□□□ -1.97
SSN8P47821 CHO2YGR157W 2610 nt2.72□□□□□ -1.97
SSN8P47821 YJL169WYJL169W 369 nt2.72□□□□□ -1.97
SSN8P47821 ACF4YJR083C 930 nt2.72□□□□□ -1.97
SSN8P47821 EAP1YKL204W 1899 nt2.72□□□□□ -1.97
SSN8P47821 RPL23AYBL087C 414 nt2.72□□□□□ -1.97
SSN8P47821 MIX23YBL107C 591 nt2.72□□□□□ -1.97
SSN8P47821 YBR071WYBR071W 636 nt2.72□□□□□ -1.97
SSN8P47821 YTA7YGR270W 4140 nt2.72□□□□□ -1.97
SSN8P47821 YDR239CYDR239C 2364 nt2.72□□□□□ -1.97
SSN8P47821 ESC1YMR219W 4977 nt2.71□□□□□ -1.97
SSN8P47821 YIL169CYIL169C 2988 nt2.71□□□□□ -1.98
SSN8P47821 YJL132WYJL132W 2253 nt2.71□□□□□ -1.98
SSN8P47821 ERG11YHR007C 1593 nt2.71□□□□□ -1.98
SSN8P47821 snR59snR59 78 nt2.71□□□□□ -1.98
SSN8P47821 YCR090CYCR090C 549 nt2.71□□□□□ -1.98
SSN8P47821 OPI6YDL096C 327 nt2.71□□□□□ -1.98
SSN8P47821 YDL187CYDL187C 330 nt2.71□□□□□ -1.98
SSN8P47821 SLX9YGR081C 633 nt2.71□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms