Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.4■□□□□ 0.22
DhfrP00375 Gm40848-201ENSMUST00000221998 324 ntBASIC16.4■□□□□ 0.22
DhfrP00375 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DhfrP00375 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DhfrP00375 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DhfrP00375 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DhfrP00375 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.4■□□□□ 0.22
DhfrP00375 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DhfrP00375 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DhfrP00375 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DhfrP00375 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.39■□□□□ 0.21
DhfrP00375 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DhfrP00375 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.39■□□□□ 0.21
DhfrP00375 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DhfrP00375 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.39■□□□□ 0.21
DhfrP00375 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.39■□□□□ 0.21
DhfrP00375 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DhfrP00375 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
DhfrP00375 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.38■□□□□ 0.21
DhfrP00375 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DhfrP00375 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.38■□□□□ 0.21
DhfrP00375 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.38■□□□□ 0.21
DhfrP00375 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.38■□□□□ 0.21
DhfrP00375 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.38■□□□□ 0.21
DhfrP00375 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DhfrP00375 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
DhfrP00375 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.37■□□□□ 0.21
DhfrP00375 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.37■□□□□ 0.21
DhfrP00375 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DhfrP00375 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
DhfrP00375 Gm27801-201ENSMUST00000184174 223 ntBASIC16.37■□□□□ 0.21
DhfrP00375 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.37■□□□□ 0.21
DhfrP00375 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DhfrP00375 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.37■□□□□ 0.21
DhfrP00375 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DhfrP00375 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DhfrP00375 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.36■□□□□ 0.21
DhfrP00375 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.36■□□□□ 0.21
DhfrP00375 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
DhfrP00375 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
DhfrP00375 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DhfrP00375 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.35■□□□□ 0.21
DhfrP00375 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DhfrP00375 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DhfrP00375 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DhfrP00375 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms