Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.38□□□□□ -0.11
Efnb3O35393 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.37□□□□□ -0.11
Efnb3O35393 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.37□□□□□ -0.11
Efnb3O35393 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Efnb3O35393 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Efnb3O35393 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Efnb3O35393 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Gm15039-201ENSMUST00000118914 875 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Mir7075-201ENSMUST00000184187 82 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.36□□□□□ -0.11
Efnb3O35393 Gm45417-201ENSMUST00000209533 758 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.36□□□□□ -0.11
Efnb3O35393 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Efnb3O35393 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Efnb3O35393 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Efnb3O35393 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.35□□□□□ -0.11
Efnb3O35393 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Efnb3O35393 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.35□□□□□ -0.11
Efnb3O35393 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.35□□□□□ -0.11
Efnb3O35393 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Efnb3O35393 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Efnb3O35393 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.34□□□□□ -0.11
Efnb3O35393 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.34□□□□□ -0.11
Efnb3O35393 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.34□□□□□ -0.11
Efnb3O35393 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.34□□□□□ -0.11
Efnb3O35393 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Efnb3O35393 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Efnb3O35393 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Efnb3O35393 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Efnb3O35393 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Efnb3O35393 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Efnb3O35393 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms