Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.04□□□□□ -0.16
MsmbO08540 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.04□□□□□ -0.16
MsmbO08540 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MsmbO08540 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.04□□□□□ -0.16
MsmbO08540 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MsmbO08540 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.03□□□□□ -0.16
MsmbO08540 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MsmbO08540 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Gm10653-202ENSMUST00000139570 835 ntBASIC14.03□□□□□ -0.16
MsmbO08540 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.03□□□□□ -0.16
MsmbO08540 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MsmbO08540 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MsmbO08540 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MsmbO08540 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MsmbO08540 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MsmbO08540 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.02□□□□□ -0.16
MsmbO08540 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MsmbO08540 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MsmbO08540 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MsmbO08540 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
MsmbO08540 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MsmbO08540 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MsmbO08540 Gm12527-201ENSMUST00000117967 564 ntBASIC14.02□□□□□ -0.17
MsmbO08540 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MsmbO08540 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MsmbO08540 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MsmbO08540 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.01□□□□□ -0.17
MsmbO08540 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.01□□□□□ -0.17
MsmbO08540 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MsmbO08540 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.01□□□□□ -0.17
MsmbO08540 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MsmbO08540 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MsmbO08540 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14□□□□□ -0.17
MsmbO08540 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MsmbO08540 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14□□□□□ -0.17
MsmbO08540 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14□□□□□ -0.17
MsmbO08540 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MsmbO08540 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14□□□□□ -0.17
MsmbO08540 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MsmbO08540 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.99□□□□□ -0.17
MsmbO08540 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MsmbO08540 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.99□□□□□ -0.17
MsmbO08540 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MsmbO08540 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.99□□□□□ -0.17
MsmbO08540 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.99□□□□□ -0.17
MsmbO08540 Gm20049-201ENSMUST00000219950 730 ntBASIC13.99□□□□□ -0.17
MsmbO08540 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms