Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-4A0A075B654 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Gm7143-201ENSMUST00000222811 859 ntBASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav3-4A0A075B654 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-4A0A075B654 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-4A0A075B654 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-4A0A075B654 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-4A0A075B654 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav3-4A0A075B654 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 AA386476-201ENSMUST00000098781 1665 ntBASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-4A0A075B654 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.26□□□□□ -0.45
Trav3-4A0A075B654 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms