Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Mir7075-201ENSMUST00000184187 82 ntBASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm38205-201ENSMUST00000192243 258 ntBASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms