Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Gm46311-201ENSMUST00000217971 203 ntBASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.27□□□□□ -1.25
Syne3Q4FZC9 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.27□□□□□ -1.25
Syne3Q4FZC9 AC115357.1-201ENSMUST00000227575 466 ntBASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Syne3Q4FZC9 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Mir760-201ENSMUST00000103257 119 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm26419-201ENSMUST00000104272 133 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm26474-201ENSMUST00000116762 122 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm11833-201ENSMUST00000118393 853 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm5319-201ENSMUST00000118965 873 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 BC064078-201ENSMUST00000122939 570 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm25969-201ENSMUST00000157166 132 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm2976-201ENSMUST00000160362 513 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm17022-201ENSMUST00000166415 922 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Mir6241-201ENSMUST00000184225 103 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm28335-201ENSMUST00000186204 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm28558-201ENSMUST00000187373 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm28734-201ENSMUST00000188104 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm28968-201ENSMUST00000190413 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm38229-201ENSMUST00000191931 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm38121-201ENSMUST00000193213 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm37991-201ENSMUST00000194297 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm38035-201ENSMUST00000194427 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm38350-201ENSMUST00000194789 696 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm4525-201ENSMUST00000198831 254 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm42581-201ENSMUST00000201774 966 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm9604-201ENSMUST00000211175 433 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm18242-201ENSMUST00000218455 542 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Syne3Q4FZC9 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Syne3Q4FZC9 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms